| | | Single nucleotide variant (intron variant +1 more) | Muscular dystrophy-dystroglycanopathy +8 more | GPathogenic/Likely pathogenic |
| | | Single nucleotide variant (intron variant +1 more) | Muscular dystrophy-dystroglycanopathy (congenital with intellectual disability), type B3 +3 more | GPathogenic/Likely pathogenic |
| | POMGNT1, TSPAN1 (K376fs +2 more) | Deletion (frameshift variant) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 | |
| | | Single nucleotide variant (splice donor variant) | Congenital muscular alpha-dystroglycanopathy with brain and eye anomalies +10 more | GConflicting classifications of pathogenicity |
| | POMGNT1, TSPAN1 (P339fs +2 more) | Indel (frameshift variant) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 | |
| | POMGNT1, TSPAN1 (R299H +2 more) | Single nucleotide variant (missense variant) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 +5 more | GPathogenic/Likely pathogenic |
| | POMGNT1, TSPAN1 (E292fs +2 more) | Deletion (frameshift variant) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 | |
| | POMGNT1, TSPAN1 (K230* +2 more) | Single nucleotide variant (nonsense) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 | |
| | POMGNT1, TSPAN1 (R224H +2 more) | Single nucleotide variant (missense variant) | Muscular dystrophy-dystroglycanopathy type B6 +6 more | GConflicting classifications of pathogenicity |
| | POMGNT1, TSPAN1 (I194fs +2 more) | Duplication (frameshift variant) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 | |
| | POMGNT1, TSPAN1 (P102fs +2 more) | Deletion (frameshift variant) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 | |
| | POMGNT1, TSPAN1 (W212* +2 more) | Single nucleotide variant (nonsense) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 | |
| | TSPAN1, POMGNT1 (K205fs +2 more) | Indel (frameshift variant) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 | |
| | TSPAN1, POMGNT1 (R172fs +2 more) | Deletion (frameshift variant) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 | |
| | POMGNT1, TSPAN1 (S10* +2 more) | Single nucleotide variant (nonsense) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 | |
| | POMGNT1, TSPAN1 (R129W +1 more) | Single nucleotide variant (missense variant +1 more) | not provided +6 more | GConflicting classifications of pathogenicity |
| | | Single nucleotide variant (nonsense +1 more) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 | |
| | | Deletion (frameshift variant +1 more) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 | |
| | | Single nucleotide variant (nonsense +1 more) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 | |
| | | Deletion (frameshift variant +1 more) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 | |
| | | Deletion (frameshift variant +1 more) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 | |
| | | Deletion (frameshift variant) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 | |
| | | Deletion (frameshift variant) | Muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A3 | |